No. words: 898; after pruning: 872


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 5.9 (1,1:269)  254  0.00 0.37 0.00  MoSU024F_C08_BF293421Ld05P019F03P019F091F1_060.ab1        1   270 (189)  C MoSU024R_C08_BF293421Ld05P019F03P019F091R1_060.ab1   (168)   271     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  134 nodes

 69 str. conn. components

Path
    1  C MoSU024R_C08_BF293421Ld05P019F03P019F091R1_060.ab1   439 
  344    MoSU024F_C08_BF293421Ld05P019F03P019F091F1_060.ab1   175 
  356  C MoSU024R_C08_BF293421Ld05P019F03P019F091R1_060.ab1    84 
  360    MoSU024F_C08_BF293421Ld05P019F03P019F091F1_060.ab1   191 
  368  C MoSU024R_C08_BF293421Ld05P019F03P019F091R1_060.ab1    72 
  376    MoSU024F_C08_BF293421Ld05P019F03P019F091F1_060.ab1   207 
  384  C MoSU024R_C08_BF293421Ld05P019F03P019F091R1_060.ab1    56 
  400    MoSU024F_C08_BF293421Ld05P019F03P019F091F1_060.ab1   231 
  416  C MoSU024R_C08_BF293421Ld05P019F03P019F091R1_060.ab1    24 
  424    MoSU024F_C08_BF293421Ld05P019F03P019F091F1_060.ab1   255 
Contig length: old 628, new 628

Contig length: old 628, new 628
New start: 0