No. words: 1380; after pruning: 1354


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.1 (1,1:1014)  356  0.00 0.00 0.00  MoSU007F_C03_BF428955As01P015A02A081F1_027.ab1      293   657 (0)  C MoSU007R_C03_BF428955As01P015A02A081R1_027.ab1   (0)   723   359 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  184 nodes

 94 str. conn. components

Path
    1    MoSU007F_C03_BF428955As01P015A02A081F1_027.ab1     1 
  504  C MoSU007R_C03_BF428955As01P015A02A081R1_027.ab1   512 
Contig length: old 1015, new 1015

Contig length: old 1015, new 1015
New start: 0