No. words: 1367; after pruning: 1341


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.4 (1,1:983)  369  0.26 0.00 0.00  MoSU010F_C07_BF428955As01P018B02P018B081F1_059.ab1      274   656 (0)  C MoSU010R_C07_BF428955As01P018B02P018B081R1_059.ab1   (0)   711   329 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  190 nodes

 97 str. conn. components

Path
    1    MoSU010F_C07_BF428955As01P018B02P018B081F1_059.ab1     1 
  461  C MoSU010R_C07_BF428955As01P018B02P018B081R1_059.ab1   524 
  465    MoSU010F_C07_BF428955As01P018B02P018B081F1_059.ab1   465 
  469  C MoSU010R_C07_BF428955As01P018B02P018B081R1_059.ab1   516 
  473    MoSU010F_C07_BF428955As01P018B02P018B081F1_059.ab1   473 
  481  C MoSU010R_C07_BF428955As01P018B02P018B081R1_059.ab1   504 
  485    MoSU010F_C07_BF428955As01P018B02P018B081F1_059.ab1   485 
  489  C MoSU010R_C07_BF428955As01P018B02P018B081R1_059.ab1   496 
  497    MoSU010F_C07_BF428955As01P018B02P018B081F1_059.ab1   497 
  505  C MoSU010R_C07_BF428955As01P018B02P018B081R1_059.ab1   480 
  529    MoSU010F_C07_BF428955As01P018B02P018B081F1_059.ab1   529 
  533  C MoSU010R_C07_BF428955As01P018B02P018B081R1_059.ab1   452 
Contig length: old 984, new 984

Contig length: old 984, new 984
New start: 0