No. words: 1584; after pruning: 1558


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.6 (1,1:1015)  555  0.00 0.00 0.00  MoSU007F_H03_BF428955Ld02P015A02A081F1_017.ab1      211   778 (0)  C MoSU007R_H03_BF428955Ld02P015A02A081R1_017.ab1   (0)   806   239 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  284 nodes

 144 str. conn. components

Path
    1    MoSU007F_H03_BF428955Ld02P015A02A081F1_017.ab1     1 
  376  C MoSU007R_H03_BF428955Ld02P015A02A081R1_017.ab1   641 
  380    MoSU007F_H03_BF428955Ld02P015A02A081F1_017.ab1   380 
  520  C MoSU007R_H03_BF428955Ld02P015A02A081R1_017.ab1   497 
Contig length: old 1016, new 1016

Contig length: old 1016, new 1016
New start: 0