No. words: 1564; after pruning: 1538


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.4 (1,1:1006)  546  0.00 0.00 0.00  MoSU010F_B08_BF428955Ld04P018B02P018B081F1_062.ab1      221   777 (0)  C MoSU010R_B08_BF428955Ld04P018B02P018B081R1_062.ab1   (0)   787   231 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  280 nodes

 142 str. conn. components

Path
    1    MoSU010F_B08_BF428955Ld04P018B02P018B081F1_062.ab1     1 
  432  C MoSU010R_B08_BF428955Ld04P018B02P018B081R1_062.ab1   576 
  444    MoSU010F_B08_BF428955Ld04P018B02P018B081F1_062.ab1   444 
  456  C MoSU010R_B08_BF428955Ld04P018B02P018B081R1_062.ab1   552 
  476    MoSU010F_B08_BF428955Ld04P018B02P018B081F1_062.ab1   476 
  484  C MoSU010R_B08_BF428955Ld04P018B02P018B081R1_062.ab1   524 
Contig length: old 1007, new 1007

Contig length: old 1007, new 1007
New start: 0