No. words: 1624; after pruning: 1584


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.9 (1,1:1002)  594  0.32 0.00 0.32  MoSU007F_C04_BF428955Ld05P015A02A081F1_028.ab1      206   827 (0)  C MoSU007R_C04_BF428955Ld05P015A02A081R1_028.ab1   (0)   797   178 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  298 nodes

 151 str. conn. components

Path
    1    MoSU007F_C04_BF428955Ld05P015A02A081F1_028.ab1     1 
  498  C MoSU007R_C04_BF428955Ld05P015A02A081R1_028.ab1   507 
Contig length: old 1003, new 1004

Contig length: old 1004, new 1004
New start: 0