No. words: 1496; after pruning: 1470


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.7 (1,1:1012)  473  0.00 0.00 0.00  MoSU007F_F04_BF428955Ld08P015A02A081F1_022.ab1      287   769 (0)  C MoSU007R_F04_BF428955Ld08P015A02A081R1_022.ab1   (0)   727   245 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1    MoSU007F_F04_BF428955Ld08P015A02A081F1_022.ab1     1 
  527  C MoSU007R_F04_BF428955Ld08P015A02A081R1_022.ab1   487 
  531    MoSU007F_F04_BF428955Ld08P015A02A081F1_022.ab1   531 
  543  C MoSU007R_F04_BF428955Ld08P015A02A081R1_022.ab1   471 
Contig length: old 1013, new 1013

Contig length: old 1013, new 1013
New start: 0