No. words: 1179; after pruning: 1153


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 3.1 (1,1:1010)  163  0.00 0.00 0.00  MoSU010F_F08_BF428955Ld08P018B02P018B081F1_054.ab1      429   595 (1)  C MoSU010R_F08_BF428955Ld08P018B02P018B081R1_054.ab1   (0)   583   417 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  86 nodes

 45 str. conn. components

Path
    1    MoSU010F_F08_BF428955Ld08P018B02P018B081F1_054.ab1     1 
  476  C MoSU010R_F08_BF428955Ld08P018B02P018B081R1_054.ab1   536 
  480    MoSU010F_F08_BF428955Ld08P018B02P018B081F1_054.ab1   480 
  492  C MoSU010R_F08_BF428955Ld08P018B02P018B081R1_054.ab1   520 
Contig length: old 1011, new 1011

Contig length: old 1011, new 1011
New start: 0