No. words: 1628; after pruning: 1602


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.1 (1,1:1060)  540  0.35 0.35 0.00  MoSU007F_G04_BF428955Ld09P015A02A081F1_020.ab1      261   826 (0)  C MoSU007R_G04_BF428955Ld09P015A02A081R1_020.ab1   (0)   802   235 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  274 nodes

 139 str. conn. components

Path
    1    MoSU007F_G04_BF428955Ld09P015A02A081F1_020.ab1     1 
  527  C MoSU007R_G04_BF428955Ld09P015A02A081R1_020.ab1   536 
  531    MoSU007F_G04_BF428955Ld09P015A02A081F1_020.ab1   531 
  547  C MoSU007R_G04_BF428955Ld09P015A02A081R1_020.ab1   516 
Contig length: old 1061, new 1062

Contig length: old 1062, new 1062
New start: 0