No. words: 1771; after pruning: 1703


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.5 (1,1:1012)  717  0.92 0.00 0.13  MoSU007F_B03_BF428955Tu02P015A02A081F1_029.ab1       57   814 (0)  C MoSU007R_B03_BF428955Tu02P015A02A081R1_029.ab1   (0)   957   201 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  364 nodes

 184 str. conn. components

Path
    1    MoSU007F_B03_BF428955Tu02P015A02A081F1_029.ab1     1 
  520  C MoSU007R_B03_BF428955Tu02P015A02A081R1_029.ab1   495 
  532    MoSU007F_B03_BF428955Tu02P015A02A081F1_029.ab1   532 
  560  C MoSU007R_B03_BF428955Tu02P015A02A081R1_029.ab1   455 
Contig length: old 1013, new 1014

Contig length: old 1014, new 1014
New start: 0