No. words: 1069; after pruning: 1029


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.1 (1,1:869)  188  1.01 0.00 0.00  MoSU004F_D11_BF473825As02P005F01F071F1_090.ab1       42   240 (0)  C MoSU004R_D11_BF473825As02P005F01F071R1_090.ab1   (0)   829   631 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  92 nodes

 48 str. conn. components

Path
    1    MoSU004F_D11_BF473825As02P005F01F071F1_090.ab1     1 
  133  C MoSU004R_D11_BF473825As02P005F01F071R1_090.ab1   738 
  137    MoSU004F_D11_BF473825As02P005F01F071F1_090.ab1   137 
  141  C MoSU004R_D11_BF473825As02P005F01F071R1_090.ab1   730 
  145    MoSU004F_D11_BF473825As02P005F01F071F1_090.ab1   145 
  173  C MoSU004R_D11_BF473825As02P005F01F071R1_090.ab1   698 
  187    MoSU004F_D11_BF473825As02P005F01F071F1_090.ab1   187 
  207  C MoSU004R_D11_BF473825As02P005F01F071R1_090.ab1   664 
  215    MoSU004F_D11_BF473825As02P005F01F071F1_090.ab1   215 
  219  C MoSU004R_D11_BF473825As02P005F01F071R1_090.ab1   652 
  223    MoSU004F_D11_BF473825As02P005F01F071F1_090.ab1   223 
  235  C MoSU004R_D11_BF473825As02P005F01F071R1_090.ab1   636 
Contig length: old 870, new 870

Contig length: old 870, new 870
New start: 0