No. words: 1565; after pruning: 1539


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.6 (1,1:649)  611  0.15 0.46 0.00  MoSU006F_H07_BF473825Ld02P015B05B111F1_060.ab1        1   649 (141)  C MoSU006R_H07_BF473825Ld02P015B05B111R1_060.ab1   (123)   652     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  316 nodes

 160 str. conn. components

Path
    1  C MoSU006R_H07_BF473825Ld02P015B05B111R1_060.ab1   775 
  159    MoSU006F_H07_BF473825Ld02P015B05B111F1_060.ab1    33 
  187  C MoSU006R_H07_BF473825Ld02P015B05B111R1_060.ab1   589 
  191    MoSU006F_H07_BF473825Ld02P015B05B111F1_060.ab1    65 
  203  C MoSU006R_H07_BF473825Ld02P015B05B111R1_060.ab1   573 
  207    MoSU006F_H07_BF473825Ld02P015B05B111F1_060.ab1    81 
  235  C MoSU006R_H07_BF473825Ld02P015B05B111R1_060.ab1   541 
  239    MoSU006F_H07_BF473825Ld02P015B05B111F1_060.ab1   113 
  243  C MoSU006R_H07_BF473825Ld02P015B05B111R1_060.ab1   533 
  255    MoSU006F_H07_BF473825Ld02P015B05B111F1_060.ab1   129 
  263  C MoSU006R_H07_BF473825Ld02P015B05B111R1_060.ab1   513 
  275    MoSU006F_H07_BF473825Ld02P015B05B111F1_060.ab1   149 
  279  C MoSU006R_H07_BF473825Ld02P015B05B111R1_060.ab1   497 
  287    MoSU006F_H07_BF473825Ld02P015B05B111F1_060.ab1   161 
  291  C MoSU006R_H07_BF473825Ld02P015B05B111R1_060.ab1   485 
  295    MoSU006F_H07_BF473825Ld02P015B05B111F1_060.ab1   169 
  299  C MoSU006R_H07_BF473825Ld02P015B05B111R1_060.ab1   477 
  307    MoSU006F_H07_BF473825Ld02P015B05B111F1_060.ab1   181 
  375  C MoSU006R_H07_BF473825Ld02P015B05B111R1_060.ab1   401 
  383    MoSU006F_H07_BF473825Ld02P015B05B111F1_060.ab1   257 
  427  C MoSU006R_H07_BF473825Ld02P015B05B111R1_060.ab1   349 
  431    MoSU006F_H07_BF473825Ld02P015B05B111F1_060.ab1   305 
  503  C MoSU006R_H07_BF473825Ld02P015B05B111R1_060.ab1   273 
  527    MoSU006F_H07_BF473825Ld02P015B05B111F1_060.ab1   401 
  535  C MoSU006R_H07_BF473825Ld02P015B05B111R1_060.ab1   241 
  543    MoSU006F_H07_BF473825Ld02P015B05B111F1_060.ab1   417 
  555  C MoSU006R_H07_BF473825Ld02P015B05B111R1_060.ab1   221 
  571    MoSU006F_H07_BF473825Ld02P015B05B111F1_060.ab1   445 
  575  C MoSU006R_H07_BF473825Ld02P015B05B111R1_060.ab1   201 
  599    MoSU006F_H07_BF473825Ld02P015B05B111F1_060.ab1   473 
  603  C MoSU006R_H07_BF473825Ld02P015B05B111R1_060.ab1   173 
  611    MoSU006F_H07_BF473825Ld02P015B05B111F1_060.ab1   485 
  615  C MoSU006R_H07_BF473825Ld02P015B05B111R1_060.ab1   161 
  627    MoSU006F_H07_BF473825Ld02P015B05B111F1_060.ab1   501 
  639  C MoSU006R_H07_BF473825Ld02P015B05B111R1_060.ab1   137 
  735    MoSU006F_H07_BF473825Ld02P015B05B111F1_060.ab1   609 
  743  C MoSU006R_H07_BF473825Ld02P015B05B111R1_060.ab1    33 
  751    MoSU006F_H07_BF473825Ld02P015B05B111F1_060.ab1   625 
  755  C MoSU006R_H07_BF473825Ld02P015B05B111R1_060.ab1    21 
  759    MoSU006F_H07_BF473825Ld02P015B05B111F1_060.ab1   633 
Contig length: old 915, new 916

Contig length: old 916, new 916
New start: 0