No. words: 1593; after pruning: 1567


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.9 (1,1:669)  637  0.00 0.30 0.00  MoSU006F_A08_BF473825Ld03P015B05B111F1_053.ab1        1   669 (139)  C MoSU006R_A08_BF473825Ld03P015B05B111R1_053.ab1   (114)   671     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  330 nodes

 167 str. conn. components

Path
    1  C MoSU006R_A08_BF473825Ld03P015B05B111R1_053.ab1   785 
  138    MoSU006F_A08_BF473825Ld03P015B05B111F1_053.ab1    22 
  146  C MoSU006R_A08_BF473825Ld03P015B05B111R1_053.ab1   640 
  150    MoSU006F_A08_BF473825Ld03P015B05B111F1_053.ab1    34 
  214  C MoSU006R_A08_BF473825Ld03P015B05B111R1_053.ab1   572 
  218    MoSU006F_A08_BF473825Ld03P015B05B111F1_053.ab1   102 
  234  C MoSU006R_A08_BF473825Ld03P015B05B111R1_053.ab1   552 
  246    MoSU006F_A08_BF473825Ld03P015B05B111F1_053.ab1   130 
  262  C MoSU006R_A08_BF473825Ld03P015B05B111R1_053.ab1   524 
  270    MoSU006F_A08_BF473825Ld03P015B05B111F1_053.ab1   154 
  286  C MoSU006R_A08_BF473825Ld03P015B05B111R1_053.ab1   500 
  290    MoSU006F_A08_BF473825Ld03P015B05B111F1_053.ab1   174 
  362  C MoSU006R_A08_BF473825Ld03P015B05B111R1_053.ab1   424 
  374    MoSU006F_A08_BF473825Ld03P015B05B111F1_053.ab1   258 
  414  C MoSU006R_A08_BF473825Ld03P015B05B111R1_053.ab1   372 
  422    MoSU006F_A08_BF473825Ld03P015B05B111F1_053.ab1   306 
  498  C MoSU006R_A08_BF473825Ld03P015B05B111R1_053.ab1   288 
  522    MoSU006F_A08_BF473825Ld03P015B05B111F1_053.ab1   406 
  526  C MoSU006R_A08_BF473825Ld03P015B05B111R1_053.ab1   260 
  586    MoSU006F_A08_BF473825Ld03P015B05B111F1_053.ab1   470 
  606  C MoSU006R_A08_BF473825Ld03P015B05B111R1_053.ab1   180 
  614    MoSU006F_A08_BF473825Ld03P015B05B111F1_053.ab1   498 
  630  C MoSU006R_A08_BF473825Ld03P015B05B111R1_053.ab1   156 
  634    MoSU006F_A08_BF473825Ld03P015B05B111F1_053.ab1   518 
  654  C MoSU006R_A08_BF473825Ld03P015B05B111R1_053.ab1   132 
  670    MoSU006F_A08_BF473825Ld03P015B05B111F1_053.ab1   554 
  674  C MoSU006R_A08_BF473825Ld03P015B05B111R1_053.ab1   112 
  726    MoSU006F_A08_BF473825Ld03P015B05B111F1_053.ab1   610 
  746  C MoSU006R_A08_BF473825Ld03P015B05B111R1_053.ab1    40 
  754    MoSU006F_A08_BF473825Ld03P015B05B111F1_053.ab1   638 
  762  C MoSU006R_A08_BF473825Ld03P015B05B111R1_053.ab1    24 
  778    MoSU006F_A08_BF473825Ld03P015B05B111F1_053.ab1   662 
Contig length: old 923, new 924

Contig length: old 924, new 924
New start: 0