No. words: 1571; after pruning: 1545


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.4 (1,1:651)  622  0.00 0.00 0.15  MoSU006F_F08_BF473825Ld08P015B05B111F1_063.ab1        1   652 (122)  C MoSU006R_F08_BF473825Ld08P015B05B111R1_063.ab1   (146)   651     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  322 nodes

 163 str. conn. components

Path
    1  C MoSU006R_F08_BF473825Ld08P015B05B111R1_063.ab1   797 
  150    MoSU006F_F08_BF473825Ld08P015B05B111F1_063.ab1     4 
  154  C MoSU006R_F08_BF473825Ld08P015B05B111R1_063.ab1   644 
  166    MoSU006F_F08_BF473825Ld08P015B05B111F1_063.ab1    20 
  254  C MoSU006R_F08_BF473825Ld08P015B05B111R1_063.ab1   544 
  266    MoSU006F_F08_BF473825Ld08P015B05B111F1_063.ab1   120 
  282  C MoSU006R_F08_BF473825Ld08P015B05B111R1_063.ab1   516 
  286    MoSU006F_F08_BF473825Ld08P015B05B111F1_063.ab1   140 
  298  C MoSU006R_F08_BF473825Ld08P015B05B111R1_063.ab1   500 
  302    MoSU006F_F08_BF473825Ld08P015B05B111F1_063.ab1   156 
  430  C MoSU006R_F08_BF473825Ld08P015B05B111R1_063.ab1   368 
  434    MoSU006F_F08_BF473825Ld08P015B05B111F1_063.ab1   288 
  458  C MoSU006R_F08_BF473825Ld08P015B05B111R1_063.ab1   340 
  462    MoSU006F_F08_BF473825Ld08P015B05B111F1_063.ab1   316 
  466  C MoSU006R_F08_BF473825Ld08P015B05B111R1_063.ab1   332 
  470    MoSU006F_F08_BF473825Ld08P015B05B111F1_063.ab1   324 
  506  C MoSU006R_F08_BF473825Ld08P015B05B111R1_063.ab1   292 
  530    MoSU006F_F08_BF473825Ld08P015B05B111F1_063.ab1   384 
  538  C MoSU006R_F08_BF473825Ld08P015B05B111R1_063.ab1   260 
  542    MoSU006F_F08_BF473825Ld08P015B05B111F1_063.ab1   396 
  558  C MoSU006R_F08_BF473825Ld08P015B05B111R1_063.ab1   240 
  626    MoSU006F_F08_BF473825Ld08P015B05B111F1_063.ab1   480 
  634  C MoSU006R_F08_BF473825Ld08P015B05B111R1_063.ab1   164 
  646    MoSU006F_F08_BF473825Ld08P015B05B111F1_063.ab1   500 
  686  C MoSU006R_F08_BF473825Ld08P015B05B111R1_063.ab1   112 
  690    MoSU006F_F08_BF473825Ld08P015B05B111F1_063.ab1   544 
  718  C MoSU006R_F08_BF473825Ld08P015B05B111R1_063.ab1    80 
  722    MoSU006F_F08_BF473825Ld08P015B05B111F1_063.ab1   576 
  752  C MoSU006R_F08_BF473825Ld08P015B05B111R1_063.ab1    47 
  756    MoSU006F_F08_BF473825Ld08P015B05B111F1_063.ab1   610 
  760  C MoSU006R_F08_BF473825Ld08P015B05B111R1_063.ab1    39 
  768    MoSU006F_F08_BF473825Ld08P015B05B111F1_063.ab1   622 
  776  C MoSU006R_F08_BF473825Ld08P015B05B111R1_063.ab1    23 
  780    MoSU006F_F08_BF473825Ld08P015B05B111F1_063.ab1   634 
  784  C MoSU006R_F08_BF473825Ld08P015B05B111R1_063.ab1    15 
  792    MoSU006F_F08_BF473825Ld08P015B05B111F1_063.ab1   646 
Contig length: old 919, new 920

Contig length: old 920, new 920
New start: 0