No. words: 1567; after pruning: 1541


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.2 (1,1:650)  618  0.15 0.00 0.15  MoSU006F_G08_BF473825Ld09P015B05B111F1_056.ab1        1   651 (133)  C MoSU006R_G08_BF473825Ld09P015B05B111R1_056.ab1   (133)   650     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  322 nodes

 163 str. conn. components

Path
    1  C MoSU006R_G08_BF473825Ld09P015B05B111R1_056.ab1   783 
  137    MoSU006F_G08_BF473825Ld09P015B05B111F1_056.ab1     4 
  141  C MoSU006R_G08_BF473825Ld09P015B05B111R1_056.ab1   643 
  149    MoSU006F_G08_BF473825Ld09P015B05B111F1_056.ab1    16 
  361  C MoSU006R_G08_BF473825Ld09P015B05B111R1_056.ab1   423 
  369    MoSU006F_G08_BF473825Ld09P015B05B111F1_056.ab1   236 
  501  C MoSU006R_G08_BF473825Ld09P015B05B111R1_056.ab1   283 
  517    MoSU006F_G08_BF473825Ld09P015B05B111F1_056.ab1   384 
  533  C MoSU006R_G08_BF473825Ld09P015B05B111R1_056.ab1   251 
  537    MoSU006F_G08_BF473825Ld09P015B05B111F1_056.ab1   404 
  549  C MoSU006R_G08_BF473825Ld09P015B05B111R1_056.ab1   235 
  561    MoSU006F_G08_BF473825Ld09P015B05B111F1_056.ab1   428 
  577  C MoSU006R_G08_BF473825Ld09P015B05B111R1_056.ab1   207 
  585    MoSU006F_G08_BF473825Ld09P015B05B111F1_056.ab1   452 
  593  C MoSU006R_G08_BF473825Ld09P015B05B111R1_056.ab1   191 
  597    MoSU006F_G08_BF473825Ld09P015B05B111F1_056.ab1   464 
  657  C MoSU006R_G08_BF473825Ld09P015B05B111R1_056.ab1   127 
  681    MoSU006F_G08_BF473825Ld09P015B05B111F1_056.ab1   548 
  693  C MoSU006R_G08_BF473825Ld09P015B05B111R1_056.ab1    91 
  713    MoSU006F_G08_BF473825Ld09P015B05B111F1_056.ab1   580 
  749  C MoSU006R_G08_BF473825Ld09P015B05B111R1_056.ab1    35 
  753    MoSU006F_G08_BF473825Ld09P015B05B111F1_056.ab1   620 
  774  C MoSU006R_G08_BF473825Ld09P015B05B111R1_056.ab1    11 
  778    MoSU006F_G08_BF473825Ld09P015B05B111F1_056.ab1   645 
Contig length: old 916, new 917

Contig length: old 917, new 917
New start: 0