No. words: 1591; after pruning: 1565


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.4 (1,1:669)  628  0.45 0.30 0.00  MoSU006F_H08_BF473825Ld10P015B05B111F1_064.ab1        1   669 (125)  C MoSU006R_H08_BF473825Ld10P015B05B111R1_064.ab1   (126)   671     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  320 nodes

 162 str. conn. components

Path
    1  C MoSU006R_H08_BF473825Ld10P015B05B111R1_064.ab1   797 
  151    MoSU006F_H08_BF473825Ld10P015B05B111F1_064.ab1    23 
  155  C MoSU006R_H08_BF473825Ld10P015B05B111R1_064.ab1   643 
  163    MoSU006F_H08_BF473825Ld10P015B05B111F1_064.ab1    35 
  179  C MoSU006R_H08_BF473825Ld10P015B05B111R1_064.ab1   619 
  183    MoSU006F_H08_BF473825Ld10P015B05B111F1_064.ab1    55 
  195  C MoSU006R_H08_BF473825Ld10P015B05B111R1_064.ab1   603 
  199    MoSU006F_H08_BF473825Ld10P015B05B111F1_064.ab1    71 
  207  C MoSU006R_H08_BF473825Ld10P015B05B111R1_064.ab1   591 
  211    MoSU006F_H08_BF473825Ld10P015B05B111F1_064.ab1    83 
  227  C MoSU006R_H08_BF473825Ld10P015B05B111R1_064.ab1   571 
  275    MoSU006F_H08_BF473825Ld10P015B05B111F1_064.ab1   147 
  279  C MoSU006R_H08_BF473825Ld10P015B05B111R1_064.ab1   519 
  287    MoSU006F_H08_BF473825Ld10P015B05B111F1_064.ab1   159 
  303  C MoSU006R_H08_BF473825Ld10P015B05B111R1_064.ab1   495 
  307    MoSU006F_H08_BF473825Ld10P015B05B111F1_064.ab1   179 
  379  C MoSU006R_H08_BF473825Ld10P015B05B111R1_064.ab1   419 
  387    MoSU006F_H08_BF473825Ld10P015B05B111F1_064.ab1   259 
  423  C MoSU006R_H08_BF473825Ld10P015B05B111R1_064.ab1   375 
  435    MoSU006F_H08_BF473825Ld10P015B05B111F1_064.ab1   307 
  451  C MoSU006R_H08_BF473825Ld10P015B05B111R1_064.ab1   347 
  455    MoSU006F_H08_BF473825Ld10P015B05B111F1_064.ab1   327 
  507  C MoSU006R_H08_BF473825Ld10P015B05B111R1_064.ab1   291 
  523    MoSU006F_H08_BF473825Ld10P015B05B111F1_064.ab1   395 
  555  C MoSU006R_H08_BF473825Ld10P015B05B111R1_064.ab1   243 
  587    MoSU006F_H08_BF473825Ld10P015B05B111F1_064.ab1   459 
  591  C MoSU006R_H08_BF473825Ld10P015B05B111R1_064.ab1   207 
  615    MoSU006F_H08_BF473825Ld10P015B05B111F1_064.ab1   487 
  619  C MoSU006R_H08_BF473825Ld10P015B05B111R1_064.ab1   179 
  623    MoSU006F_H08_BF473825Ld10P015B05B111F1_064.ab1   495 
  643  C MoSU006R_H08_BF473825Ld10P015B05B111R1_064.ab1   155 
  647    MoSU006F_H08_BF473825Ld10P015B05B111F1_064.ab1   519 
  671  C MoSU006R_H08_BF473825Ld10P015B05B111R1_064.ab1   127 
  675    MoSU006F_H08_BF473825Ld10P015B05B111F1_064.ab1   547 
  689  C MoSU006R_H08_BF473825Ld10P015B05B111R1_064.ab1   109 
  701    MoSU006F_H08_BF473825Ld10P015B05B111F1_064.ab1   573 
  713  C MoSU006R_H08_BF473825Ld10P015B05B111R1_064.ab1    85 
  733    MoSU006F_H08_BF473825Ld10P015B05B111F1_064.ab1   605 
  745  C MoSU006R_H08_BF473825Ld10P015B05B111R1_064.ab1    53 
  749    MoSU006F_H08_BF473825Ld10P015B05B111F1_064.ab1   621 
  757  C MoSU006R_H08_BF473825Ld10P015B05B111R1_064.ab1    41 
  769    MoSU006F_H08_BF473825Ld10P015B05B111F1_064.ab1   641 
  786  C MoSU006R_H08_BF473825Ld10P015B05B111R1_064.ab1    12 
  794    MoSU006F_H08_BF473825Ld10P015B05B111F1_064.ab1   666 
Contig length: old 921, new 922

Contig length: old 922, new 922
New start: 0