No. words: 984; after pruning: 958


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    

Pass: 3
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 4
             Gap  Score    
Merge:(0)    3   -0.1 -0.1 (1,1:896)   80  0.00 0.00 0.00  MoSU004F_A11_BF473825Tu01P005F01F071F1_081.ab1       65   146 (3)  C MoSU004R_A11_BF473825Tu01P005F01F071R1_081.ab1   (2)   833   752 *

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
-0.1       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Read equivalence class histogram:
    1    2

Chimera merges: 


Contig 1:  42 nodes

 23 str. conn. components

Path
    1    MoSU004F_A11_BF473825Tu01P005F01F071F1_081.ab1     1 
  140  C MoSU004R_A11_BF473825Tu01P005F01F071R1_081.ab1   758 
Contig length: old 897, new 897

Contig length: old 897, new 897
New start: 0