No. words: 1219; after pruning: 1193


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.5 (1,1:595)  561  0.00 0.34 0.00  MoSU006F_B07_BF473825Tu02P015B05B111F1_057.ab1        1   595 (18)  C MoSU006R_B07_BF473825Tu02P015B05B111R1_057.ab1   (9)   597     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  288 nodes

 146 str. conn. components

Path
    1  C MoSU006R_B07_BF473825Tu02P015B05B111R1_057.ab1   606 
   46    MoSU006F_B07_BF473825Tu02P015B05B111F1_057.ab1    35 
   50  C MoSU006R_B07_BF473825Tu02P015B05B111R1_057.ab1   557 
   58    MoSU006F_B07_BF473825Tu02P015B05B111F1_057.ab1    47 
   90  C MoSU006R_B07_BF473825Tu02P015B05B111R1_057.ab1   517 
   94    MoSU006F_B07_BF473825Tu02P015B05B111F1_057.ab1    83 
  110  C MoSU006R_B07_BF473825Tu02P015B05B111R1_057.ab1   497 
  118    MoSU006F_B07_BF473825Tu02P015B05B111F1_057.ab1   107 
  126  C MoSU006R_B07_BF473825Tu02P015B05B111R1_057.ab1   481 
  146    MoSU006F_B07_BF473825Tu02P015B05B111F1_057.ab1   135 
  154  C MoSU006R_B07_BF473825Tu02P015B05B111R1_057.ab1   453 
  158    MoSU006F_B07_BF473825Tu02P015B05B111F1_057.ab1   147 
  162  C MoSU006R_B07_BF473825Tu02P015B05B111R1_057.ab1   445 
  186    MoSU006F_B07_BF473825Tu02P015B05B111F1_057.ab1   175 
  190  C MoSU006R_B07_BF473825Tu02P015B05B111R1_057.ab1   417 
  202    MoSU006F_B07_BF473825Tu02P015B05B111F1_057.ab1   191 
  214  C MoSU006R_B07_BF473825Tu02P015B05B111R1_057.ab1   393 
  222    MoSU006F_B07_BF473825Tu02P015B05B111F1_057.ab1   211 
  254  C MoSU006R_B07_BF473825Tu02P015B05B111R1_057.ab1   353 
  274    MoSU006F_B07_BF473825Tu02P015B05B111F1_057.ab1   263 
  282  C MoSU006R_B07_BF473825Tu02P015B05B111R1_057.ab1   325 
  330    MoSU006F_B07_BF473825Tu02P015B05B111F1_057.ab1   319 
  346  C MoSU006R_B07_BF473825Tu02P015B05B111R1_057.ab1   261 
  358    MoSU006F_B07_BF473825Tu02P015B05B111F1_057.ab1   347 
  366  C MoSU006R_B07_BF473825Tu02P015B05B111R1_057.ab1   241 
  374    MoSU006F_B07_BF473825Tu02P015B05B111F1_057.ab1   363 
  390  C MoSU006R_B07_BF473825Tu02P015B05B111R1_057.ab1   217 
  410    MoSU006F_B07_BF473825Tu02P015B05B111F1_057.ab1   399 
  418  C MoSU006R_B07_BF473825Tu02P015B05B111R1_057.ab1   189 
  426    MoSU006F_B07_BF473825Tu02P015B05B111F1_057.ab1   415 
  430  C MoSU006R_B07_BF473825Tu02P015B05B111R1_057.ab1   177 
  434    MoSU006F_B07_BF473825Tu02P015B05B111F1_057.ab1   423 
  470  C MoSU006R_B07_BF473825Tu02P015B05B111R1_057.ab1   137 
  486    MoSU006F_B07_BF473825Tu02P015B05B111F1_057.ab1   475 
  494  C MoSU006R_B07_BF473825Tu02P015B05B111R1_057.ab1   113 
  510    MoSU006F_B07_BF473825Tu02P015B05B111F1_057.ab1   499 
  518  C MoSU006R_B07_BF473825Tu02P015B05B111R1_057.ab1    89 
  526    MoSU006F_B07_BF473825Tu02P015B05B111F1_057.ab1   515 
  590  C MoSU006R_B07_BF473825Tu02P015B05B111R1_057.ab1    17 
  594    MoSU006F_B07_BF473825Tu02P015B05B111F1_057.ab1   583 
Contig length: old 623, new 624

Contig length: old 624, new 624
New start: 0