No. words: 1513; after pruning: 1487


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.4 (1,1:1157)  331  0.56 0.00 0.00  MoSU013F_E03_BF474746At01P015E03P015E091F1_023.ab1      348   702 (0)  C MoSU013R_E03_BF474746At01P015E03P015E091R1_023.ab1   (0)   811   457 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  174 nodes

 89 str. conn. components

Path
    1    MoSU013F_E03_BF474746At01P015E03P015E091F1_023.ab1     1 
  595  C MoSU013R_E03_BF474746At01P015E03P015E091R1_023.ab1   564 
  603    MoSU013F_E03_BF474746At01P015E03P015E091F1_023.ab1   603 
  607  C MoSU013R_E03_BF474746At01P015E03P015E091R1_023.ab1   552 
  615    MoSU013F_E03_BF474746At01P015E03P015E091F1_023.ab1   615 
  623  C MoSU013R_E03_BF474746At01P015E03P015E091R1_023.ab1   536 
  627    MoSU013F_E03_BF474746At01P015E03P015E091F1_023.ab1   627 
  659  C MoSU013R_E03_BF474746At01P015E03P015E091R1_023.ab1   500 
  675    MoSU013F_E03_BF474746At01P015E03P015E091F1_023.ab1   675 
  679  C MoSU013R_E03_BF474746At01P015E03P015E091R1_023.ab1   480 
Contig length: old 1158, new 1158

Contig length: old 1158, new 1158
New start: 0