No. words: 1324; after pruning: 1298


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.7 (1,1:1151)  157  0.58 0.00 0.00  MoSU013F_A03_BF474746Tu01P015E03P015E091F1_031.ab1      421   592 (0)  C MoSU013R_A03_BF474746Tu01P015E03P015E091R1_031.ab1   (0)   732   561 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  84 nodes

 44 str. conn. components

Path
    1    MoSU013F_A03_BF474746Tu01P015E03P015E091F1_031.ab1     1 
  559  C MoSU013R_A03_BF474746Tu01P015E03P015E091R1_031.ab1   594 
  567    MoSU013F_A03_BF474746Tu01P015E03P015E091F1_031.ab1   567 
  571  C MoSU013R_A03_BF474746Tu01P015E03P015E091R1_031.ab1   582 
  575    MoSU013F_A03_BF474746Tu01P015E03P015E091F1_031.ab1   575 
  579  C MoSU013R_A03_BF474746Tu01P015E03P015E091R1_031.ab1   574 
Contig length: old 1152, new 1152

Contig length: old 1152, new 1152
New start: 0