No. words: 1247; after pruning: 1207


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 8.0 (1,1:492)  473  0.00 0.41 0.20  MoSU006F_B10_BF474966Ld04P015C05C111F1_077.ab1        5   493 (134)  C MoSU006R_B10_BF474966Ld04P015C05C111R1_077.ab1   (130)   490     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  236 nodes

 120 str. conn. components

Path
    1  C MoSU006R_B10_BF474966Ld04P015C05C111R1_077.ab1   620 
  186    MoSU006F_B10_BF474966Ld04P015C05C111F1_077.ab1    58 
  194  C MoSU006R_B10_BF474966Ld04P015C05C111R1_077.ab1   427 
  210    MoSU006F_B10_BF474966Ld04P015C05C111F1_077.ab1    82 
  218  C MoSU006R_B10_BF474966Ld04P015C05C111R1_077.ab1   403 
  226    MoSU006F_B10_BF474966Ld04P015C05C111F1_077.ab1    98 
  234  C MoSU006R_B10_BF474966Ld04P015C05C111R1_077.ab1   387 
  238    MoSU006F_B10_BF474966Ld04P015C05C111F1_077.ab1   110 
  246  C MoSU006R_B10_BF474966Ld04P015C05C111R1_077.ab1   375 
  254    MoSU006F_B10_BF474966Ld04P015C05C111F1_077.ab1   126 
  270  C MoSU006R_B10_BF474966Ld04P015C05C111R1_077.ab1   351 
  278    MoSU006F_B10_BF474966Ld04P015C05C111F1_077.ab1   150 
  282  C MoSU006R_B10_BF474966Ld04P015C05C111R1_077.ab1   339 
  338    MoSU006F_B10_BF474966Ld04P015C05C111F1_077.ab1   210 
  342  C MoSU006R_B10_BF474966Ld04P015C05C111R1_077.ab1   279 
  362    MoSU006F_B10_BF474966Ld04P015C05C111F1_077.ab1   234 
  398  C MoSU006R_B10_BF474966Ld04P015C05C111R1_077.ab1   223 
  434    MoSU006F_B10_BF474966Ld04P015C05C111F1_077.ab1   306 
  442  C MoSU006R_B10_BF474966Ld04P015C05C111R1_077.ab1   179 
  446    MoSU006F_B10_BF474966Ld04P015C05C111F1_077.ab1   318 
  486  C MoSU006R_B10_BF474966Ld04P015C05C111R1_077.ab1   135 
  494    MoSU006F_B10_BF474966Ld04P015C05C111F1_077.ab1   366 
  566  C MoSU006R_B10_BF474966Ld04P015C05C111R1_077.ab1    55 
  574    MoSU006F_B10_BF474966Ld04P015C05C111F1_077.ab1   446 
Contig length: old 754, new 755

Contig length: old 755, new 755
New start: 0 
S Change at: 93; seg lengths: entry 1, contig 1