No. words: 1250; after pruning: 1224


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 9.2 (1,1:498)  475  0.00 0.61 0.20  MoSU006F_F10_BF474966Ld08P015C05C111F1_079.ab1        5   499 (129)  C MoSU006R_F10_BF474966Ld08P015C05C111R1_079.ab1   (125)   497     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  238 nodes

 121 str. conn. components

Path
    1  C MoSU006R_F10_BF474966Ld08P015C05C111R1_079.ab1   622 
  169    MoSU006F_F10_BF474966Ld08P015C05C111F1_079.ab1    45 
  173  C MoSU006R_F10_BF474966Ld08P015C05C111R1_079.ab1   450 
  177    MoSU006F_F10_BF474966Ld08P015C05C111F1_079.ab1    53 
  189  C MoSU006R_F10_BF474966Ld08P015C05C111R1_079.ab1   434 
  205    MoSU006F_F10_BF474966Ld08P015C05C111F1_079.ab1    81 
  213  C MoSU006R_F10_BF474966Ld08P015C05C111R1_079.ab1   410 
  221    MoSU006F_F10_BF474966Ld08P015C05C111F1_079.ab1    97 
  229  C MoSU006R_F10_BF474966Ld08P015C05C111R1_079.ab1   394 
  233    MoSU006F_F10_BF474966Ld08P015C05C111F1_079.ab1   109 
  241  C MoSU006R_F10_BF474966Ld08P015C05C111R1_079.ab1   382 
  253    MoSU006F_F10_BF474966Ld08P015C05C111F1_079.ab1   129 
  269  C MoSU006R_F10_BF474966Ld08P015C05C111R1_079.ab1   354 
  273    MoSU006F_F10_BF474966Ld08P015C05C111F1_079.ab1   149 
  289  C MoSU006R_F10_BF474966Ld08P015C05C111R1_079.ab1   334 
  301    MoSU006F_F10_BF474966Ld08P015C05C111F1_079.ab1   177 
  313  C MoSU006R_F10_BF474966Ld08P015C05C111R1_079.ab1   310 
  317    MoSU006F_F10_BF474966Ld08P015C05C111F1_079.ab1   193 
  349  C MoSU006R_F10_BF474966Ld08P015C05C111R1_079.ab1   274 
  353    MoSU006F_F10_BF474966Ld08P015C05C111F1_079.ab1   229 
  361  C MoSU006R_F10_BF474966Ld08P015C05C111R1_079.ab1   262 
  377    MoSU006F_F10_BF474966Ld08P015C05C111F1_079.ab1   253 
  385  C MoSU006R_F10_BF474966Ld08P015C05C111R1_079.ab1   238 
  429    MoSU006F_F10_BF474966Ld08P015C05C111F1_079.ab1   305 
  437  C MoSU006R_F10_BF474966Ld08P015C05C111R1_079.ab1   186 
  441    MoSU006F_F10_BF474966Ld08P015C05C111F1_079.ab1   317 
  481  C MoSU006R_F10_BF474966Ld08P015C05C111R1_079.ab1   142 
  489    MoSU006F_F10_BF474966Ld08P015C05C111F1_079.ab1   365 
  501  C MoSU006R_F10_BF474966Ld08P015C05C111R1_079.ab1   122 
  505    MoSU006F_F10_BF474966Ld08P015C05C111F1_079.ab1   381 
  517  C MoSU006R_F10_BF474966Ld08P015C05C111R1_079.ab1   106 
  529    MoSU006F_F10_BF474966Ld08P015C05C111F1_079.ab1   405 
  561  C MoSU006R_F10_BF474966Ld08P015C05C111R1_079.ab1    62 
  565    MoSU006F_F10_BF474966Ld08P015C05C111F1_079.ab1   441 
Contig length: old 751, new 752

Contig length: old 752, new 752
New start: 0