No. words: 826; after pruning: 800


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.6 (1,1:353)  344  0.28 0.00 0.28  MoSU012F_F07_BF474966Ta19P020A06P005F081F1_053.ab1        1   354 (61)  C MoSU012R_F07_BF474966Ta19P020A06P005F081R1_053.ab1   (58)   353     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  174 nodes

 89 str. conn. components

Path
    1  C MoSU012R_F07_BF474966Ta19P020A06P005F081R1_053.ab1   411 
  110    MoSU012F_F07_BF474966Ta19P020A06P005F081F1_053.ab1    52 
  122  C MoSU012R_F07_BF474966Ta19P020A06P005F081R1_053.ab1   290 
  142    MoSU012F_F07_BF474966Ta19P020A06P005F081F1_053.ab1    84 
  146  C MoSU012R_F07_BF474966Ta19P020A06P005F081R1_053.ab1   266 
  150    MoSU012F_F07_BF474966Ta19P020A06P005F081F1_053.ab1    92 
  154  C MoSU012R_F07_BF474966Ta19P020A06P005F081R1_053.ab1   258 
  170    MoSU012F_F07_BF474966Ta19P020A06P005F081F1_053.ab1   112 
  210  C MoSU012R_F07_BF474966Ta19P020A06P005F081R1_053.ab1   202 
  214    MoSU012F_F07_BF474966Ta19P020A06P005F081F1_053.ab1   156 
  226  C MoSU012R_F07_BF474966Ta19P020A06P005F081R1_053.ab1   186 
  230    MoSU012F_F07_BF474966Ta19P020A06P005F081F1_053.ab1   172 
Contig length: old 472, new 473

Contig length: old 473, new 473
New start: 0