No. words: 781; after pruning: 755


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 6.4 (1,1:341)  330  0.29 0.29 0.00  MoSU012F_C05_BF474966Td05P005F02P020E051F1_043.ab1        1   342 (50)  C MoSU012R_C05_BF474966Td05P005F02P020E051R1_043.ab1   (46)   343     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  168 nodes

 86 str. conn. components

Path
    1  C MoSU012R_C05_BF474966Td05P005F02P020E051R1_043.ab1   389 
  236    MoSU012F_C05_BF474966Td05P005F02P020E051F1_043.ab1   189 
  320  C MoSU012R_C05_BF474966Td05P005F02P020E051R1_043.ab1    70 
  328    MoSU012F_C05_BF474966Td05P005F02P020E051F1_043.ab1   281 
Contig length: old 439, new 439

Contig length: old 439, new 439
New start: 0