No. words: 1025; after pruning: 999


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.9 (1,1:494)  487  0.00 0.00 0.20  MoSU006F_B09_BF474966Tu02P015C05C111F1_073.ab1        1   495 (13)  C MoSU006R_B09_BF474966Tu02P015C05C111R1_073.ab1   (23)   494     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  246 nodes

 125 str. conn. components

Path
    1  C MoSU006R_B09_BF474966Tu02P015C05C111R1_073.ab1   517 
   51    MoSU006F_B09_BF474966Tu02P015C05C111F1_073.ab1    28 
   55  C MoSU006R_B09_BF474966Tu02P015C05C111R1_073.ab1   463 
   79    MoSU006F_B09_BF474966Tu02P015C05C111F1_073.ab1    56 
   83  C MoSU006R_B09_BF474966Tu02P015C05C111R1_073.ab1   435 
  119    MoSU006F_B09_BF474966Tu02P015C05C111F1_073.ab1    96 
  123  C MoSU006R_B09_BF474966Tu02P015C05C111R1_073.ab1   395 
  131    MoSU006F_B09_BF474966Tu02P015C05C111F1_073.ab1   108 
  135  C MoSU006R_B09_BF474966Tu02P015C05C111R1_073.ab1   383 
  147    MoSU006F_B09_BF474966Tu02P015C05C111F1_073.ab1   124 
  151  C MoSU006R_B09_BF474966Tu02P015C05C111R1_073.ab1   367 
  199    MoSU006F_B09_BF474966Tu02P015C05C111F1_073.ab1   176 
  207  C MoSU006R_B09_BF474966Tu02P015C05C111R1_073.ab1   311 
  227    MoSU006F_B09_BF474966Tu02P015C05C111F1_073.ab1   204 
  287  C MoSU006R_B09_BF474966Tu02P015C05C111R1_073.ab1   231 
  323    MoSU006F_B09_BF474966Tu02P015C05C111F1_073.ab1   300 
  379  C MoSU006R_B09_BF474966Tu02P015C05C111R1_073.ab1   139 
  383    MoSU006F_B09_BF474966Tu02P015C05C111F1_073.ab1   360 
  443  C MoSU006R_B09_BF474966Tu02P015C05C111R1_073.ab1    75 
  459    MoSU006F_B09_BF474966Tu02P015C05C111F1_073.ab1   436 
Contig length: old 530, new 531

Contig length: old 531, new 531
New start: 0