No. words: 1402; after pruning: 1376


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.7 (1,1:660)  645  0.00 0.00 0.00  MoSU023F_E01_BF475129At01P018B06P018B121F1_007.ab1        1   661 (35)  C MoSU023R_E01_BF475129At01P018B06P018B121R1_007.ab1   (45)   661     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  332 nodes

 168 str. conn. components

Path
    1  C MoSU023R_E01_BF475129At01P018B06P018B121R1_007.ab1   706 
   61    MoSU023F_E01_BF475129At01P018B06P018B121F1_007.ab1    16 
   65  C MoSU023R_E01_BF475129At01P018B06P018B121R1_007.ab1   642 
   69    MoSU023F_E01_BF475129At01P018B06P018B121F1_007.ab1    24 
   77  C MoSU023R_E01_BF475129At01P018B06P018B121R1_007.ab1   630 
   81    MoSU023F_E01_BF475129At01P018B06P018B121F1_007.ab1    36 
   89  C MoSU023R_E01_BF475129At01P018B06P018B121R1_007.ab1   618 
   97    MoSU023F_E01_BF475129At01P018B06P018B121F1_007.ab1    52 
  101  C MoSU023R_E01_BF475129At01P018B06P018B121R1_007.ab1   606 
  105    MoSU023F_E01_BF475129At01P018B06P018B121F1_007.ab1    60 
  121  C MoSU023R_E01_BF475129At01P018B06P018B121R1_007.ab1   586 
  137    MoSU023F_E01_BF475129At01P018B06P018B121F1_007.ab1    92 
  145  C MoSU023R_E01_BF475129At01P018B06P018B121R1_007.ab1   562 
  149    MoSU023F_E01_BF475129At01P018B06P018B121F1_007.ab1   104 
  157  C MoSU023R_E01_BF475129At01P018B06P018B121R1_007.ab1   550 
  169    MoSU023F_E01_BF475129At01P018B06P018B121F1_007.ab1   124 
  177  C MoSU023R_E01_BF475129At01P018B06P018B121R1_007.ab1   530 
  209    MoSU023F_E01_BF475129At01P018B06P018B121F1_007.ab1   164 
  245  C MoSU023R_E01_BF475129At01P018B06P018B121R1_007.ab1   462 
  257    MoSU023F_E01_BF475129At01P018B06P018B121F1_007.ab1   212 
  261  C MoSU023R_E01_BF475129At01P018B06P018B121R1_007.ab1   446 
  269    MoSU023F_E01_BF475129At01P018B06P018B121F1_007.ab1   224 
  293  C MoSU023R_E01_BF475129At01P018B06P018B121R1_007.ab1   414 
  305    MoSU023F_E01_BF475129At01P018B06P018B121F1_007.ab1   260 
  337  C MoSU023R_E01_BF475129At01P018B06P018B121R1_007.ab1   370 
  365    MoSU023F_E01_BF475129At01P018B06P018B121F1_007.ab1   320 
  389  C MoSU023R_E01_BF475129At01P018B06P018B121R1_007.ab1   318 
  393    MoSU023F_E01_BF475129At01P018B06P018B121F1_007.ab1   348 
  509  C MoSU023R_E01_BF475129At01P018B06P018B121R1_007.ab1   198 
  517    MoSU023F_E01_BF475129At01P018B06P018B121F1_007.ab1   472 
  521  C MoSU023R_E01_BF475129At01P018B06P018B121R1_007.ab1   186 
  529    MoSU023F_E01_BF475129At01P018B06P018B121F1_007.ab1   484 
  585  C MoSU023R_E01_BF475129At01P018B06P018B121R1_007.ab1   122 
  613    MoSU023F_E01_BF475129At01P018B06P018B121F1_007.ab1   568 
  625  C MoSU023R_E01_BF475129At01P018B06P018B121R1_007.ab1    82 
  637    MoSU023F_E01_BF475129At01P018B06P018B121F1_007.ab1   592 
  645  C MoSU023R_E01_BF475129At01P018B06P018B121R1_007.ab1    62 
  657    MoSU023F_E01_BF475129At01P018B06P018B121F1_007.ab1   612 
  669  C MoSU023R_E01_BF475129At01P018B06P018B121R1_007.ab1    38 
  673    MoSU023F_E01_BF475129At01P018B06P018B121F1_007.ab1   628 
Contig length: old 741, new 741

Contig length: old 741, new 741
New start: 0