No. words: 1637; after pruning: 1611


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.5 (1,1:660)  629  0.61 0.00 0.15  MoSU023F_G01_BF475129Ld01P018B06P018B121F1_003.ab1        1   661 (152)  C MoSU023R_G01_BF475129Ld01P018B06P018B121R1_003.ab1   (164)   660     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  320 nodes

 162 str. conn. components

Path
    1  C MoSU023R_G01_BF475129Ld01P018B06P018B121R1_003.ab1   824 
  172    MoSU023F_G01_BF475129Ld01P018B06P018B121F1_003.ab1     8 
  188  C MoSU023R_G01_BF475129Ld01P018B06P018B121R1_003.ab1   637 
  192    MoSU023F_G01_BF475129Ld01P018B06P018B121F1_003.ab1    28 
  196  C MoSU023R_G01_BF475129Ld01P018B06P018B121R1_003.ab1   629 
  210    MoSU023F_G01_BF475129Ld01P018B06P018B121F1_003.ab1    46 
  238  C MoSU023R_G01_BF475129Ld01P018B06P018B121R1_003.ab1   587 
  258    MoSU023F_G01_BF475129Ld01P018B06P018B121F1_003.ab1    94 
  262  C MoSU023R_G01_BF475129Ld01P018B06P018B121R1_003.ab1   563 
  266    MoSU023F_G01_BF475129Ld01P018B06P018B121F1_003.ab1   102 
  270  C MoSU023R_G01_BF475129Ld01P018B06P018B121R1_003.ab1   555 
  290    MoSU023F_G01_BF475129Ld01P018B06P018B121F1_003.ab1   126 
  302  C MoSU023R_G01_BF475129Ld01P018B06P018B121R1_003.ab1   523 
  314    MoSU023F_G01_BF475129Ld01P018B06P018B121F1_003.ab1   150 
  358  C MoSU023R_G01_BF475129Ld01P018B06P018B121R1_003.ab1   467 
  362    MoSU023F_G01_BF475129Ld01P018B06P018B121F1_003.ab1   198 
  450  C MoSU023R_G01_BF475129Ld01P018B06P018B121R1_003.ab1   375 
  518    MoSU023F_G01_BF475129Ld01P018B06P018B121F1_003.ab1   354 
  522  C MoSU023R_G01_BF475129Ld01P018B06P018B121R1_003.ab1   303 
  542    MoSU023F_G01_BF475129Ld01P018B06P018B121F1_003.ab1   378 
  546  C MoSU023R_G01_BF475129Ld01P018B06P018B121R1_003.ab1   279 
  630    MoSU023F_G01_BF475129Ld01P018B06P018B121F1_003.ab1   466 
  634  C MoSU023R_G01_BF475129Ld01P018B06P018B121R1_003.ab1   191 
  682    MoSU023F_G01_BF475129Ld01P018B06P018B121F1_003.ab1   518 
  690  C MoSU023R_G01_BF475129Ld01P018B06P018B121R1_003.ab1   135 
  698    MoSU023F_G01_BF475129Ld01P018B06P018B121F1_003.ab1   534 
  702  C MoSU023R_G01_BF475129Ld01P018B06P018B121R1_003.ab1   123 
  714    MoSU023F_G01_BF475129Ld01P018B06P018B121F1_003.ab1   550 
  722  C MoSU023R_G01_BF475129Ld01P018B06P018B121R1_003.ab1   103 
  738    MoSU023F_G01_BF475129Ld01P018B06P018B121F1_003.ab1   574 
  746  C MoSU023R_G01_BF475129Ld01P018B06P018B121R1_003.ab1    79 
  754    MoSU023F_G01_BF475129Ld01P018B06P018B121F1_003.ab1   590 
  766  C MoSU023R_G01_BF475129Ld01P018B06P018B121R1_003.ab1    59 
  770    MoSU023F_G01_BF475129Ld01P018B06P018B121F1_003.ab1   606 
  788  C MoSU023R_G01_BF475129Ld01P018B06P018B121R1_003.ab1    37 
  800    MoSU023F_G01_BF475129Ld01P018B06P018B121F1_003.ab1   636 
  813  C MoSU023R_G01_BF475129Ld01P018B06P018B121R1_003.ab1    13 
  821    MoSU023F_G01_BF475129Ld01P018B06P018B121F1_003.ab1   657 
Contig length: old 976, new 977

Contig length: old 977, new 977
New start: 0