No. words: 1623; after pruning: 1597


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.6 (1,1:661)  644  0.15 0.00 0.00  MoSU023F_H01_BF475129Ld02P018B06P018B121F1_001.ab1        1   662 (143)  C MoSU023R_H01_BF475129Ld02P018B06P018B121R1_001.ab1   (156)   662     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  330 nodes

 167 str. conn. components

Path
    1  C MoSU023R_H01_BF475129Ld02P018B06P018B121R1_001.ab1   818 
  184    MoSU023F_H01_BF475129Ld02P018B06P018B121F1_001.ab1    28 
  188  C MoSU023R_H01_BF475129Ld02P018B06P018B121R1_001.ab1   631 
  668    MoSU023F_H01_BF475129Ld02P018B06P018B121F1_001.ab1   512 
  700  C MoSU023R_H01_BF475129Ld02P018B06P018B121R1_001.ab1   119 
  708    MoSU023F_H01_BF475129Ld02P018B06P018B121F1_001.ab1   552 
Contig length: old 961, new 961

Contig length: old 961, new 961
New start: 0