No. words: 1337; after pruning: 1311


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.4 (1,1:634)  534  0.54 0.00 0.00  MoSU023F_C02_BF475129Ld05P018B06P018B121F1_012.ab1       80   635 (146)  C MoSU023R_C02_BF475129Ld05P018B06P018B121R1_012.ab1   (0)   556     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  272 nodes

 138 str. conn. components

Path
    1    MoSU023F_C02_BF475129Ld05P018B06P018B121F1_012.ab1     1 
  113  C MoSU023R_C02_BF475129Ld05P018B06P018B121R1_012.ab1   523 
  117    MoSU023F_C02_BF475129Ld05P018B06P018B121F1_012.ab1   117 
  457  C MoSU023R_C02_BF475129Ld05P018B06P018B121R1_012.ab1   179 
  485    MoSU023F_C02_BF475129Ld05P018B06P018B121F1_012.ab1   485 
  489  C MoSU023R_C02_BF475129Ld05P018B06P018B121R1_012.ab1   147 
  549    MoSU023F_C02_BF475129Ld05P018B06P018B121F1_012.ab1   549 
  557  C MoSU023R_C02_BF475129Ld05P018B06P018B121R1_012.ab1    79 
  569    MoSU023F_C02_BF475129Ld05P018B06P018B121F1_012.ab1   569 
  599  C MoSU023R_C02_BF475129Ld05P018B06P018B121R1_012.ab1    37 
  611    MoSU023F_C02_BF475129Ld05P018B06P018B121F1_012.ab1   611 
Contig length: old 781, new 781

Contig length: old 781, new 781
New start: 0