No. words: 1360; after pruning: 1334


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.9 (1,1:629)  612  0.00 0.00 0.16  MoSU023F_A01_BF475129Tu01P018B06P018B121F1_015.ab1        1   630 (53)  C MoSU023R_A01_BF475129Tu01P018B06P018B121R1_015.ab1   (48)   629     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  314 nodes

 159 str. conn. components

Path
    1  C MoSU023R_A01_BF475129Tu01P018B06P018B121R1_015.ab1   677 
  104    MoSU023F_A01_BF475129Tu01P018B06P018B121F1_015.ab1    56 
  120  C MoSU023R_A01_BF475129Tu01P018B06P018B121R1_015.ab1   558 
  176    MoSU023F_A01_BF475129Tu01P018B06P018B121F1_015.ab1   128 
  192  C MoSU023R_A01_BF475129Tu01P018B06P018B121R1_015.ab1   486 
  380    MoSU023F_A01_BF475129Tu01P018B06P018B121F1_015.ab1   332 
  496  C MoSU023R_A01_BF475129Tu01P018B06P018B121R1_015.ab1   182 
  528    MoSU023F_A01_BF475129Tu01P018B06P018B121F1_015.ab1   480 
  540  C MoSU023R_A01_BF475129Tu01P018B06P018B121R1_015.ab1   138 
  560    MoSU023F_A01_BF475129Tu01P018B06P018B121F1_015.ab1   512 
  568  C MoSU023R_A01_BF475129Tu01P018B06P018B121R1_015.ab1   110 
  572    MoSU023F_A01_BF475129Tu01P018B06P018B121F1_015.ab1   524 
  576  C MoSU023R_A01_BF475129Tu01P018B06P018B121R1_015.ab1   102 
  580    MoSU023F_A01_BF475129Tu01P018B06P018B121F1_015.ab1   532 
  588  C MoSU023R_A01_BF475129Tu01P018B06P018B121R1_015.ab1    90 
  592    MoSU023F_A01_BF475129Tu01P018B06P018B121F1_015.ab1   544 
  604  C MoSU023R_A01_BF475129Tu01P018B06P018B121R1_015.ab1    74 
  612    MoSU023F_A01_BF475129Tu01P018B06P018B121F1_015.ab1   564 
  624  C MoSU023R_A01_BF475129Tu01P018B06P018B121R1_015.ab1    54 
  636    MoSU023F_A01_BF475129Tu01P018B06P018B121F1_015.ab1   588 
Contig length: old 730, new 731

Contig length: old 731, new 731
New start: 0