No. words: 1353; after pruning: 1327


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.9 (1,1:632)  615  0.00 0.00 0.16  MoSU023F_B01_BF475129Tu02P018B06P018B121F1_013.ab1        1   633 (41)  C MoSU023R_B01_BF475129Tu02P018B06P018B121R1_013.ab1   (47)   632     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  316 nodes

 160 str. conn. components

Path
    1  C MoSU023R_B01_BF475129Tu02P018B06P018B121R1_013.ab1   679 
  175    MoSU023F_B01_BF475129Tu02P018B06P018B121F1_013.ab1   128 
  179  C MoSU023R_B01_BF475129Tu02P018B06P018B121R1_013.ab1   501 
  279    MoSU023F_B01_BF475129Tu02P018B06P018B121F1_013.ab1   232 
  303  C MoSU023R_B01_BF475129Tu02P018B06P018B121R1_013.ab1   377 
  379    MoSU023F_B01_BF475129Tu02P018B06P018B121F1_013.ab1   332 
  495  C MoSU023R_B01_BF475129Tu02P018B06P018B121R1_013.ab1   185 
  543    MoSU023F_B01_BF475129Tu02P018B06P018B121F1_013.ab1   496 
  563  C MoSU023R_B01_BF475129Tu02P018B06P018B121R1_013.ab1   117 
  571    MoSU023F_B01_BF475129Tu02P018B06P018B121F1_013.ab1   524 
  575  C MoSU023R_B01_BF475129Tu02P018B06P018B121R1_013.ab1   105 
  579    MoSU023F_B01_BF475129Tu02P018B06P018B121F1_013.ab1   532 
  587  C MoSU023R_B01_BF475129Tu02P018B06P018B121R1_013.ab1    93 
  591    MoSU023F_B01_BF475129Tu02P018B06P018B121F1_013.ab1   544 
  603  C MoSU023R_B01_BF475129Tu02P018B06P018B121R1_013.ab1    77 
  615    MoSU023F_B01_BF475129Tu02P018B06P018B121F1_013.ab1   568 
  623  C MoSU023R_B01_BF475129Tu02P018B06P018B121R1_013.ab1    57 
  631    MoSU023F_B01_BF475129Tu02P018B06P018B121F1_013.ab1   584 
  639  C MoSU023R_B01_BF475129Tu02P018B06P018B121R1_013.ab1    41 
  647    MoSU023F_B01_BF475129Tu02P018B06P018B121F1_013.ab1   600 
Contig length: old 720, new 721

Contig length: old 721, new 721
New start: 0