No. words: 1547; after pruning: 1479


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.5 (1,1:730)  692  0.41 0.00 0.27  MoSU034F_C03_BF482529As01P019G01P019G071F1_027.ab1        1   732 (26)  C MoSU034R_C03_BF482529As01P019G01P019G071R1_027.ab1   (59)   730     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  348 nodes

 176 str. conn. components

Path
    1  C MoSU034R_C03_BF482529As01P019G01P019G071R1_027.ab1   789 
   65    MoSU034F_C03_BF482529As01P019G01P019G071F1_027.ab1     6 
   73  C MoSU034R_C03_BF482529As01P019G01P019G071R1_027.ab1   717 
   77    MoSU034F_C03_BF482529As01P019G01P019G071F1_027.ab1    18 
   85  C MoSU034R_C03_BF482529As01P019G01P019G071R1_027.ab1   705 
   93    MoSU034F_C03_BF482529As01P019G01P019G071F1_027.ab1    34 
  140  C MoSU034R_C03_BF482529As01P019G01P019G071R1_027.ab1   650 
  144    MoSU034F_C03_BF482529As01P019G01P019G071F1_027.ab1    85 
  184  C MoSU034R_C03_BF482529As01P019G01P019G071R1_027.ab1   606 
  192    MoSU034F_C03_BF482529As01P019G01P019G071F1_027.ab1   133 
  212  C MoSU034R_C03_BF482529As01P019G01P019G071R1_027.ab1   578 
  240    MoSU034F_C03_BF482529As01P019G01P019G071F1_027.ab1   181 
  280  C MoSU034R_C03_BF482529As01P019G01P019G071R1_027.ab1   510 
  320    MoSU034F_C03_BF482529As01P019G01P019G071F1_027.ab1   261 
  328  C MoSU034R_C03_BF482529As01P019G01P019G071R1_027.ab1   462 
  352    MoSU034F_C03_BF482529As01P019G01P019G071F1_027.ab1   293 
  368  C MoSU034R_C03_BF482529As01P019G01P019G071R1_027.ab1   422 
  396    MoSU034F_C03_BF482529As01P019G01P019G071F1_027.ab1   337 
  400  C MoSU034R_C03_BF482529As01P019G01P019G071R1_027.ab1   390 
  436    MoSU034F_C03_BF482529As01P019G01P019G071F1_027.ab1   377 
  464  C MoSU034R_C03_BF482529As01P019G01P019G071R1_027.ab1   326 
  496    MoSU034F_C03_BF482529As01P019G01P019G071F1_027.ab1   437 
  512  C MoSU034R_C03_BF482529As01P019G01P019G071R1_027.ab1   278 
  524    MoSU034F_C03_BF482529As01P019G01P019G071F1_027.ab1   465 
  544  C MoSU034R_C03_BF482529As01P019G01P019G071R1_027.ab1   246 
  580    MoSU034F_C03_BF482529As01P019G01P019G071F1_027.ab1   521 
  584  C MoSU034R_C03_BF482529As01P019G01P019G071R1_027.ab1   206 
  588    MoSU034F_C03_BF482529As01P019G01P019G071F1_027.ab1   529 
  596  C MoSU034R_C03_BF482529As01P019G01P019G071R1_027.ab1   194 
  668    MoSU034F_C03_BF482529As01P019G01P019G071F1_027.ab1   609 
  672  C MoSU034R_C03_BF482529As01P019G01P019G071R1_027.ab1   118 
  694    MoSU034F_C03_BF482529As01P019G01P019G071F1_027.ab1   635 
  698  C MoSU034R_C03_BF482529As01P019G01P019G071R1_027.ab1    92 
  730    MoSU034F_C03_BF482529As01P019G01P019G071F1_027.ab1   671 
  742  C MoSU034R_C03_BF482529As01P019G01P019G071R1_027.ab1    48 
  762    MoSU034F_C03_BF482529As01P019G01P019G071F1_027.ab1   703 
Contig length: old 816, new 817

Contig length: old 817, new 817
New start: 0