No. words: 1567; after pruning: 1471


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 15.5 (1,1:748)  697  1.07 0.13 0.13  MoSU034F_D03_BF482529As02P019G01P019G071F1_025.ab1        4   749 (26)  C MoSU034R_D03_BF482529As02P019G01P019G071R1_025.ab1   (46)   746     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  348 nodes

 176 str. conn. components

Path
    1  C MoSU034R_D03_BF482529As02P019G01P019G071R1_025.ab1   792 
   66    MoSU034F_D03_BF482529As02P019G01P019G071F1_025.ab1    22 
   70  C MoSU034R_D03_BF482529As02P019G01P019G071R1_025.ab1   723 
  121    MoSU034F_D03_BF482529As02P019G01P019G071F1_025.ab1    77 
  125  C MoSU034R_D03_BF482529As02P019G01P019G071R1_025.ab1   668 
  129    MoSU034F_D03_BF482529As02P019G01P019G071F1_025.ab1    85 
  141  C MoSU034R_D03_BF482529As02P019G01P019G071R1_025.ab1   652 
  157    MoSU034F_D03_BF482529As02P019G01P019G071F1_025.ab1   113 
  169  C MoSU034R_D03_BF482529As02P019G01P019G071R1_025.ab1   624 
  241    MoSU034F_D03_BF482529As02P019G01P019G071F1_025.ab1   197 
  245  C MoSU034R_D03_BF482529As02P019G01P019G071R1_025.ab1   548 
  305    MoSU034F_D03_BF482529As02P019G01P019G071F1_025.ab1   261 
  309  C MoSU034R_D03_BF482529As02P019G01P019G071R1_025.ab1   484 
  353    MoSU034F_D03_BF482529As02P019G01P019G071F1_025.ab1   309 
  361  C MoSU034R_D03_BF482529As02P019G01P019G071R1_025.ab1   432 
  373    MoSU034F_D03_BF482529As02P019G01P019G071F1_025.ab1   329 
  377  C MoSU034R_D03_BF482529As02P019G01P019G071R1_025.ab1   416 
  437    MoSU034F_D03_BF482529As02P019G01P019G071F1_025.ab1   393 
  445  C MoSU034R_D03_BF482529As02P019G01P019G071R1_025.ab1   348 
  481    MoSU034F_D03_BF482529As02P019G01P019G071F1_025.ab1   437 
  489  C MoSU034R_D03_BF482529As02P019G01P019G071R1_025.ab1   304 
  505    MoSU034F_D03_BF482529As02P019G01P019G071F1_025.ab1   461 
  513  C MoSU034R_D03_BF482529As02P019G01P019G071R1_025.ab1   280 
  669    MoSU034F_D03_BF482529As02P019G01P019G071F1_025.ab1   625 
  673  C MoSU034R_D03_BF482529As02P019G01P019G071R1_025.ab1   120 
  711    MoSU034F_D03_BF482529As02P019G01P019G071F1_025.ab1   667 
  715  C MoSU034R_D03_BF482529As02P019G01P019G071R1_025.ab1    78 
  733    MoSU034F_D03_BF482529As02P019G01P019G071F1_025.ab1   689 
  745  C MoSU034R_D03_BF482529As02P019G01P019G071R1_025.ab1    48 
  753    MoSU034F_D03_BF482529As02P019G01P019G071F1_025.ab1   709 
Contig length: old 818, new 819

Contig length: old 819, new 819
New start: 0