No. words: 1547; after pruning: 1493


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)   11    0.0 10.8 (1,1:744)  689  0.27 0.14 0.27  MoSU034F_E03_BF482529At01P019G01P019G071F1_023.ab1       12   746 (25)  C MoSU034R_E03_BF482529At01P019G01P019G071R1_023.ab1   (42)   734     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
11       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  358 nodes

 181 str. conn. components

Path
    1  C MoSU034R_E03_BF482529At01P019G01P019G071R1_023.ab1   776 
   61    MoSU034F_E03_BF482529At01P019G01P019G071F1_023.ab1    29 
   69  C MoSU034R_E03_BF482529At01P019G01P019G071R1_023.ab1   708 
   73    MoSU034F_E03_BF482529At01P019G01P019G071F1_023.ab1    41 
   81  C MoSU034R_E03_BF482529At01P019G01P019G071R1_023.ab1   696 
   93    MoSU034F_E03_BF482529At01P019G01P019G071F1_023.ab1    61 
  101  C MoSU034R_E03_BF482529At01P019G01P019G071R1_023.ab1   676 
  105    MoSU034F_E03_BF482529At01P019G01P019G071F1_023.ab1    73 
  121  C MoSU034R_E03_BF482529At01P019G01P019G071R1_023.ab1   656 
  129    MoSU034F_E03_BF482529At01P019G01P019G071F1_023.ab1    97 
  137  C MoSU034R_E03_BF482529At01P019G01P019G071R1_023.ab1   640 
  141    MoSU034F_E03_BF482529At01P019G01P019G071F1_023.ab1   109 
  145  C MoSU034R_E03_BF482529At01P019G01P019G071R1_023.ab1   632 
  149    MoSU034F_E03_BF482529At01P019G01P019G071F1_023.ab1   117 
  193  C MoSU034R_E03_BF482529At01P019G01P019G071R1_023.ab1   584 
  197    MoSU034F_E03_BF482529At01P019G01P019G071F1_023.ab1   165 
  249  C MoSU034R_E03_BF482529At01P019G01P019G071R1_023.ab1   528 
  253    MoSU034F_E03_BF482529At01P019G01P019G071F1_023.ab1   221 
  277  C MoSU034R_E03_BF482529At01P019G01P019G071R1_023.ab1   500 
  297    MoSU034F_E03_BF482529At01P019G01P019G071F1_023.ab1   265 
  305  C MoSU034R_E03_BF482529At01P019G01P019G071R1_023.ab1   472 
  309    MoSU034F_E03_BF482529At01P019G01P019G071F1_023.ab1   277 
  313  C MoSU034R_E03_BF482529At01P019G01P019G071R1_023.ab1   464 
  317    MoSU034F_E03_BF482529At01P019G01P019G071F1_023.ab1   285 
  325  C MoSU034R_E03_BF482529At01P019G01P019G071R1_023.ab1   452 
  333    MoSU034F_E03_BF482529At01P019G01P019G071F1_023.ab1   301 
  337  C MoSU034R_E03_BF482529At01P019G01P019G071R1_023.ab1   440 
  345    MoSU034F_E03_BF482529At01P019G01P019G071F1_023.ab1   313 
  349  C MoSU034R_E03_BF482529At01P019G01P019G071R1_023.ab1   428 
  397    MoSU034F_E03_BF482529At01P019G01P019G071F1_023.ab1   365 
  405  C MoSU034R_E03_BF482529At01P019G01P019G071R1_023.ab1   372 
  661    MoSU034F_E03_BF482529At01P019G01P019G071F1_023.ab1   629 
  665  C MoSU034R_E03_BF482529At01P019G01P019G071R1_023.ab1   112 
  749    MoSU034F_E03_BF482529At01P019G01P019G071F1_023.ab1   717 
Contig length: old 802, new 803

Contig length: old 803, new 803
New start: 0