No. words: 1181; after pruning: 1155


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 8.7 (1,1:435)  420  0.00 0.00 0.00  MoSU008F_A12_BF482530Ld02P005C06C121F1_096.ab1        1   434 (145)  C MoSU008R_A12_BF482530Ld02P005C06C121R1_096.ab1   (166)   436     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  218 nodes

 111 str. conn. components

Path
    1  C MoSU008R_A12_BF482530Ld02P005C06C121R1_096.ab1   602 
  190    MoSU008F_A12_BF482530Ld02P005C06C121F1_096.ab1    24 
  194  C MoSU008R_A12_BF482530Ld02P005C06C121R1_096.ab1   409 
  222    MoSU008F_A12_BF482530Ld02P005C06C121F1_096.ab1    56 
  230  C MoSU008R_A12_BF482530Ld02P005C06C121R1_096.ab1   373 
  242    MoSU008F_A12_BF482530Ld02P005C06C121F1_096.ab1    76 
  246  C MoSU008R_A12_BF482530Ld02P005C06C121R1_096.ab1   357 
  270    MoSU008F_A12_BF482530Ld02P005C06C121F1_096.ab1   104 
  290  C MoSU008R_A12_BF482530Ld02P005C06C121R1_096.ab1   313 
  326    MoSU008F_A12_BF482530Ld02P005C06C121F1_096.ab1   160 
  366  C MoSU008R_A12_BF482530Ld02P005C06C121R1_096.ab1   237 
  382    MoSU008F_A12_BF482530Ld02P005C06C121F1_096.ab1   216 
  398  C MoSU008R_A12_BF482530Ld02P005C06C121R1_096.ab1   205 
  446    MoSU008F_A12_BF482530Ld02P005C06C121F1_096.ab1   280 
  514  C MoSU008R_A12_BF482530Ld02P005C06C121R1_096.ab1    89 
  522    MoSU008F_A12_BF482530Ld02P005C06C121F1_096.ab1   356 
  546  C MoSU008R_A12_BF482530Ld02P005C06C121R1_096.ab1    57 
  554    MoSU008F_A12_BF482530Ld02P005C06C121F1_096.ab1   388 
Contig length: old 745, new 745

Contig length: old 745, new 745
New start: 0