No. words: 1220; after pruning: 1194


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.6 (1,1:742)  469  0.00 0.00 0.00  MoSU013F_E09_BF482781At01P018H02P018H081F1_071.ab1      181   657 (0)  C MoSU013R_E09_BF482781At01P018H02P018H081R1_071.ab1   (0)   563    87 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  240 nodes

 122 str. conn. components

Path
    1    MoSU013F_E09_BF482781At01P018H02P018H081F1_071.ab1     1 
  404  C MoSU013R_E09_BF482781At01P018H02P018H081R1_071.ab1   340 
  412    MoSU013F_E09_BF482781At01P018H02P018H081F1_071.ab1   412 
  436  C MoSU013R_E09_BF482781At01P018H02P018H081R1_071.ab1   308 
  448    MoSU013F_E09_BF482781At01P018H02P018H081F1_071.ab1   448 
  460  C MoSU013R_E09_BF482781At01P018H02P018H081R1_071.ab1   284 
  464    MoSU013F_E09_BF482781At01P018H02P018H081F1_071.ab1   464 
  484  C MoSU013R_E09_BF482781At01P018H02P018H081R1_071.ab1   260 
Contig length: old 743, new 743

Contig length: old 743, new 743
New start: 0