No. words: 1265; after pruning: 1239


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.8 (1,1:749)  504  0.19 0.00 0.00  MoSU013F_H09_BF482781Ld02P018H02P018H081F1_065.ab1      154   668 (0)  C MoSU013R_H09_BF482781Ld02P018H02P018H081R1_065.ab1   (0)   597    83 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  256 nodes

 130 str. conn. components

Path
    1    MoSU013F_H09_BF482781Ld02P018H02P018H081F1_065.ab1     1 
  345  C MoSU013R_H09_BF482781Ld02P018H02P018H081R1_065.ab1   406 
  349    MoSU013F_H09_BF482781Ld02P018H02P018H081F1_065.ab1   349 
  365  C MoSU013R_H09_BF482781Ld02P018H02P018H081R1_065.ab1   386 
  373    MoSU013F_H09_BF482781Ld02P018H02P018H081F1_065.ab1   373 
  397  C MoSU013R_H09_BF482781Ld02P018H02P018H081R1_065.ab1   354 
  401    MoSU013F_H09_BF482781Ld02P018H02P018H081F1_065.ab1   401 
  429  C MoSU013R_H09_BF482781Ld02P018H02P018H081R1_065.ab1   322 
Contig length: old 750, new 750

Contig length: old 750, new 750
New start: 0