No. words: 1150; after pruning: 1124


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.8 (1,1:748)  390  0.25 0.00 0.00  MoSU013F_F10_BF482781Ld08P018H02P018H081F1_070.ab1      185   585 (0)  C MoSU013R_F10_BF482781Ld08P018H02P018H081R1_070.ab1   (0)   565   165 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  200 nodes

 102 str. conn. components

Path
    1    MoSU013F_F10_BF482781Ld08P018H02P018H081F1_070.ab1     1 
  296  C MoSU013R_F10_BF482781Ld08P018H02P018H081R1_070.ab1   454 
  304    MoSU013F_F10_BF482781Ld08P018H02P018H081F1_070.ab1   304 
  312  C MoSU013R_F10_BF482781Ld08P018H02P018H081R1_070.ab1   438 
  320    MoSU013F_F10_BF482781Ld08P018H02P018H081F1_070.ab1   320 
  324  C MoSU013R_F10_BF482781Ld08P018H02P018H081R1_070.ab1   426 
Contig length: old 749, new 749

Contig length: old 749, new 749
New start: 0