No. words: 1547; after pruning: 1521


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 14.4 (1,1:740)  713  0.27 0.14 0.00  MoSU013F_B09_BF482781Tu02P018H02P018H081F1_077.ab1        4   741 (31)  C MoSU013R_B09_BF482781Tu02P018H02P018H081R1_077.ab1   (36)   739     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  364 nodes

 184 str. conn. components

Path
    1  C MoSU013R_B09_BF482781Tu02P018H02P018H081R1_077.ab1   775 
   52    MoSU013F_B09_BF482781Tu02P018H02P018H081F1_077.ab1    18 
  436  C MoSU013R_B09_BF482781Tu02P018H02P018H081R1_077.ab1   340 
  728    MoSU013F_B09_BF482781Tu02P018H02P018H081F1_077.ab1   694 
  739  C MoSU013R_B09_BF482781Tu02P018H02P018H081R1_077.ab1    37 
  767    MoSU013F_B09_BF482781Tu02P018H02P018H081F1_077.ab1   733 
Contig length: old 806, new 806

Contig length: old 806, new 806
New start: 0