No. words: 1025; after pruning: 999


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 4.9 (1,1:354)  345  0.00 0.28 0.28  MoSU007F_G02_BF485102Ld09P015F01F071F1_004.ab1        1   354 (168)  C MoSU007R_G02_BF485102Ld09P015F01F071R1_004.ab1   (148)   355     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  172 nodes

 88 str. conn. components

Path
    1  C MoSU007R_G02_BF485102Ld09P015F01F071R1_004.ab1   503 
  411    MoSU007F_G02_BF485102Ld09P015F01F071F1_004.ab1   262 
  419  C MoSU007R_G02_BF485102Ld09P015F01F071R1_004.ab1    85 
  431    MoSU007F_G02_BF485102Ld09P015F01F071F1_004.ab1   282 
Contig length: old 670, new 671

Contig length: old 671, new 671
New start: 0