No. words: 970; after pruning: 944


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.3 (1,1:353)  342  1.13 0.00 0.00  MoSU007F_H02_BF485102Ld10P015F01F071F1_002.ab1        1   354 (126)  C MoSU007R_H02_BF485102Ld10P015F01F071R1_002.ab1   (136)   354     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  168 nodes

 86 str. conn. components

Path
    1  C MoSU007R_H02_BF485102Ld10P015F01F071R1_002.ab1   490 
  331    MoSU007F_H02_BF485102Ld10P015F01F071F1_002.ab1   195 
Contig length: old 616, new 616

Contig length: old 616, new 616
New start: 0