No. words: 783; after pruning: 757


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    1    0.0 6.6 (1,1:341)  335  0.59 0.00 0.00  MoSU007F_A01_BF485102Tu01P015F01F071F1_015.ab1        1   341 (55)  C MoSU007R_A01_BF485102Tu01P015F01F071R1_015.ab1   (45)   342     2 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 1       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  168 nodes

 86 str. conn. components

Path
    1  C MoSU007R_A01_BF485102Tu01P015F01F071R1_015.ab1   387 
  101    MoSU007F_A01_BF485102Tu01P015F01F071F1_015.ab1    56 
  129  C MoSU007R_A01_BF485102Tu01P015F01F071R1_015.ab1   259 
  137    MoSU007F_A01_BF485102Tu01P015F01F071F1_015.ab1    92 
  145  C MoSU007R_A01_BF485102Tu01P015F01F071R1_015.ab1   243 
  249    MoSU007F_A01_BF485102Tu01P015F01F071F1_015.ab1   204 
  265  C MoSU007R_A01_BF485102Tu01P015F01F071R1_015.ab1   123 
  285    MoSU007F_A01_BF485102Tu01P015F01F071F1_015.ab1   240 
  318  C MoSU007R_A01_BF485102Tu01P015F01F071R1_015.ab1    70 
  322    MoSU007F_A01_BF485102Tu01P015F01F071F1_015.ab1   277 
Contig length: old 441, new 441

Contig length: old 441, new 441
New start: 0 
S Change at: 306; seg lengths: entry 1, contig 1