No. words: 785; after pruning: 745


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 3.9 (1,1:340)  312  0.29 0.00 0.29  MoSU035F_F09_BF485253At02P019E04P019E101F1_069.ab1        1   341 (51)  C MoSU035R_F09_BF485253At02P019E04P019E101R1_069.ab1   (53)   340     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  166 nodes

 85 str. conn. components

Path
    1  C MoSU035R_F09_BF485253At02P019E04P019E101R1_069.ab1   393 
  109    MoSU035F_F09_BF485253At02P019E04P019E101F1_069.ab1    56 
  113  C MoSU035R_F09_BF485253At02P019E04P019E101R1_069.ab1   281 
  133    MoSU035F_F09_BF485253At02P019E04P019E101F1_069.ab1    80 
  149  C MoSU035R_F09_BF485253At02P019E04P019E101R1_069.ab1   245 
  165    MoSU035F_F09_BF485253At02P019E04P019E101F1_069.ab1   112 
  264  C MoSU035R_F09_BF485253At02P019E04P019E101R1_069.ab1   130 
  268    MoSU035F_F09_BF485253At02P019E04P019E101F1_069.ab1   215 
  344  C MoSU035R_F09_BF485253At02P019E04P019E101R1_069.ab1    51 
  352    MoSU035F_F09_BF485253At02P019E04P019E101F1_069.ab1   299 
  360  C MoSU035R_F09_BF485253At02P019E04P019E101R1_069.ab1    35 
  368    MoSU035F_F09_BF485253At02P019E04P019E101F1_069.ab1   315 
Contig length: old 444, new 445

Contig length: old 445, new 445
New start: 0