No. words: 1015; after pruning: 989


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.3 (1,1:340)  316  0.00 0.00 0.29  MoSU035F_E10_BF485253Ld07P019E04P019E101F1_072.ab1        1   341 (173)  C MoSU035R_E10_BF485253Ld07P019E04P019E101R1_072.ab1   (161)   340     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  168 nodes

 86 str. conn. components

Path
    1  C MoSU035R_E10_BF485253Ld07P019E04P019E101R1_072.ab1   501 
  278    MoSU035F_E10_BF485253Ld07P019E04P019E101F1_072.ab1   117 
  294  C MoSU035R_E10_BF485253Ld07P019E04P019E101R1_072.ab1   208 
  298    MoSU035F_E10_BF485253Ld07P019E04P019E101F1_072.ab1   137 
  306  C MoSU035R_E10_BF485253Ld07P019E04P019E101R1_072.ab1   196 
  310    MoSU035F_E10_BF485253Ld07P019E04P019E101F1_072.ab1   149 
  334  C MoSU035R_E10_BF485253Ld07P019E04P019E101R1_072.ab1   168 
  390    MoSU035F_E10_BF485253Ld07P019E04P019E101F1_072.ab1   229 
  422  C MoSU035R_E10_BF485253Ld07P019E04P019E101R1_072.ab1    80 
  434    MoSU035F_E10_BF485253Ld07P019E04P019E101F1_072.ab1   273 
Contig length: old 674, new 675

Contig length: old 675, new 675
New start: 0