No. words: 529; after pruning: 503


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 4.0 (1,1:225)  209  0.00 0.44 0.44  MoSU020F_C12_BG274576Sn28P020F01P005B071F1_092.ab1        1   226 (43)  C MoSU020R_C12_BG274576Sn28P020F01P005B071R1_092.ab1   (34)   226     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  108 nodes

 56 str. conn. components

Path
    1  C MoSU020R_C12_BG274576Sn28P020F01P005B071R1_092.ab1   260 
  106    MoSU020F_C12_BG274576Sn28P020F01P005B071F1_092.ab1    71 
  114  C MoSU020R_C12_BG274576Sn28P020F01P005B071R1_092.ab1   147 
  154    MoSU020F_C12_BG274576Sn28P020F01P005B071F1_092.ab1   119 
Contig length: old 303, new 304

Contig length: old 304, new 304
New start: 0