No. words: 1108; after pruning: 1082


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.0 (1,1:503)  484  0.40 0.00 0.20  MoSU034F_D11_BG274853As02P019H01P019H071F1_089.ab1        1   504 (45)  C MoSU034R_D11_BG274853As02P019H01P019H071R1_089.ab1   (56)   503     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  248 nodes

 126 str. conn. components

Path
    1  C MoSU034R_D11_BG274853As02P019H01P019H071R1_089.ab1   559 
  147    MoSU034F_D11_BG274853As02P019H01P019H071F1_089.ab1    91 
  155  C MoSU034R_D11_BG274853As02P019H01P019H071R1_089.ab1   405 
  187    MoSU034F_D11_BG274853As02P019H01P019H071F1_089.ab1   131 
  199  C MoSU034R_D11_BG274853As02P019H01P019H071R1_089.ab1   361 
  215    MoSU034F_D11_BG274853As02P019H01P019H071F1_089.ab1   159 
  231  C MoSU034R_D11_BG274853As02P019H01P019H071R1_089.ab1   329 
  239    MoSU034F_D11_BG274853As02P019H01P019H071F1_089.ab1   183 
  247  C MoSU034R_D11_BG274853As02P019H01P019H071R1_089.ab1   313 
  271    MoSU034F_D11_BG274853As02P019H01P019H071F1_089.ab1   215 
  275  C MoSU034R_D11_BG274853As02P019H01P019H071R1_089.ab1   285 
  319    MoSU034F_D11_BG274853As02P019H01P019H071F1_089.ab1   263 
  331  C MoSU034R_D11_BG274853As02P019H01P019H071R1_089.ab1   229 
  351    MoSU034F_D11_BG274853As02P019H01P019H071F1_089.ab1   295 
  359  C MoSU034R_D11_BG274853As02P019H01P019H071R1_089.ab1   201 
  375    MoSU034F_D11_BG274853As02P019H01P019H071F1_089.ab1   319 
  383  C MoSU034R_D11_BG274853As02P019H01P019H071R1_089.ab1   177 
  395    MoSU034F_D11_BG274853As02P019H01P019H071F1_089.ab1   339 
  399  C MoSU034R_D11_BG274853As02P019H01P019H071R1_089.ab1   161 
  467    MoSU034F_D11_BG274853As02P019H01P019H071F1_089.ab1   411 
  479  C MoSU034R_D11_BG274853As02P019H01P019H071R1_089.ab1    81 
  487    MoSU034F_D11_BG274853As02P019H01P019H071F1_089.ab1   431 
  491  C MoSU034R_D11_BG274853As02P019H01P019H071R1_089.ab1    69 
  499    MoSU034F_D11_BG274853As02P019H01P019H071F1_089.ab1   443 
Contig length: old 604, new 605

Contig length: old 605, new 605
New start: 0