No. words: 1306; after pruning: 1280


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.7 (1,1:481)  474  0.00 0.00 0.00  MoSU034F_B12_BG274853Ld03P019H01P019H071F1_094.ab1        1   482 (153)  C MoSU034R_B12_BG274853Ld03P019H01P019H071R1_094.ab1   (189)   482     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1  C MoSU034R_B12_BG274853Ld03P019H01P019H071R1_094.ab1   671 
  221    MoSU034F_B12_BG274853Ld03P019H01P019H071F1_094.ab1    32 
  225  C MoSU034R_B12_BG274853Ld03P019H01P019H071R1_094.ab1   447 
  273    MoSU034F_B12_BG274853Ld03P019H01P019H071F1_094.ab1    84 
  301  C MoSU034R_B12_BG274853Ld03P019H01P019H071R1_094.ab1   371 
  505    MoSU034F_B12_BG274853Ld03P019H01P019H071F1_094.ab1   316 
  533  C MoSU034R_B12_BG274853Ld03P019H01P019H071R1_094.ab1   139 
  545    MoSU034F_B12_BG274853Ld03P019H01P019H071F1_094.ab1   356 
  573  C MoSU034R_B12_BG274853Ld03P019H01P019H071R1_094.ab1    99 
  581    MoSU034F_B12_BG274853Ld03P019H01P019H071F1_094.ab1   392 
  601  C MoSU034R_B12_BG274853Ld03P019H01P019H071R1_094.ab1    71 
  621    MoSU034F_B12_BG274853Ld03P019H01P019H071F1_094.ab1   432 
Contig length: old 824, new 824

Contig length: old 824, new 824
New start: 0