No. words: 1352; after pruning: 1326


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    4    0.0 8.4 (1,1:513)  469  1.76 0.00 0.20  MoSU034F_E12_BG274853Ld06P019H01P019H071F1_088.ab1        5   514 (155)  C MoSU034R_E12_BG274853Ld06P019H01P019H071R1_088.ab1   (174)   509     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 4       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  242 nodes

 123 str. conn. components

Path
    1  C MoSU034R_E12_BG274853Ld06P019H01P019H071R1_088.ab1   683 
  268    MoSU034F_E12_BG274853Ld06P019H01P019H071F1_088.ab1    98 
  368  C MoSU034R_E12_BG274853Ld06P019H01P019H071R1_088.ab1   316 
  408    MoSU034F_E12_BG274853Ld06P019H01P019H071F1_088.ab1   238 
  516  C MoSU034R_E12_BG274853Ld06P019H01P019H071R1_088.ab1   168 
  588    MoSU034F_E12_BG274853Ld06P019H01P019H071F1_088.ab1   418 
  620  C MoSU034R_E12_BG274853Ld06P019H01P019H071R1_088.ab1    64 
  640    MoSU034F_E12_BG274853Ld06P019H01P019H071F1_088.ab1   470 
Contig length: old 838, new 839

Contig length: old 839, new 839
New start: 0