No. words: 1299; after pruning: 1245


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 8.8 (1,1:474)  457  0.42 0.00 0.42  MoSU034F_F12_BG274853Ld07P019H01P019H071F1_086.ab1        1   476 (153)  C MoSU034R_F12_BG274853Ld07P019H01P019H071R1_086.ab1   (196)   474     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  228 nodes

 116 str. conn. components

Path
    1  C MoSU034R_F12_BG274853Ld07P019H01P019H071R1_086.ab1   670 
  628    MoSU034F_F12_BG274853Ld07P019H01P019H071F1_086.ab1   433 
  640  C MoSU034R_F12_BG274853Ld07P019H01P019H071R1_086.ab1    31 
  644    MoSU034F_F12_BG274853Ld07P019H01P019H071F1_086.ab1   449 
Contig length: old 824, new 824

Contig length: old 824, new 824
New start: 0