No. words: 1352; after pruning: 1326


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.2 (1,1:507)  489  0.00 0.00 0.39  MoSU034F_G12_BG274853Ld08P019H01P019H071F1_084.ab1        1   508 (176)  C MoSU034R_G12_BG274853Ld08P019H01P019H071R1_084.ab1   (162)   506     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  250 nodes

 127 str. conn. components

Path
    1  C MoSU034R_G12_BG274853Ld08P019H01P019H071R1_084.ab1   668 
  224    MoSU034F_G12_BG274853Ld08P019H01P019H071F1_084.ab1    63 
  228  C MoSU034R_G12_BG274853Ld08P019H01P019H071R1_084.ab1   441 
  244    MoSU034F_G12_BG274853Ld08P019H01P019H071F1_084.ab1    83 
  284  C MoSU034R_G12_BG274853Ld08P019H01P019H071R1_084.ab1   385 
  296    MoSU034F_G12_BG274853Ld08P019H01P019H071F1_084.ab1   135 
  300  C MoSU034R_G12_BG274853Ld08P019H01P019H071R1_084.ab1   369 
  340    MoSU034F_G12_BG274853Ld08P019H01P019H071F1_084.ab1   179 
  344  C MoSU034R_G12_BG274853Ld08P019H01P019H071R1_084.ab1   325 
  544    MoSU034F_G12_BG274853Ld08P019H01P019H071F1_084.ab1   383 
  552  C MoSU034R_G12_BG274853Ld08P019H01P019H071R1_084.ab1   117 
  576    MoSU034F_G12_BG274853Ld08P019H01P019H071F1_084.ab1   415 
  588  C MoSU034R_G12_BG274853Ld08P019H01P019H071R1_084.ab1    81 
  592    MoSU034F_G12_BG274853Ld08P019H01P019H071F1_084.ab1   431 
  604  C MoSU034R_G12_BG274853Ld08P019H01P019H071R1_084.ab1    65 
  628    MoSU034F_G12_BG274853Ld08P019H01P019H071F1_084.ab1   467 
Contig length: old 844, new 845

Contig length: old 845, new 845
New start: 0